Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | DU333_11520 | Not Available | Negative | 2310967 - 2311242 | 10953.2 |
| adenine dna glycosylase | DU333_11525 | Not Available | Negative | 2311270 - 2312322 | 39247.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DU333_11530 | Not Available | Positive | 2312483 - 2313202 | 27338.9 |
| duf469 domain-containing protein | DU333_11535 | Not Available | Positive | 2313202 - 2313528 | 12895.2 |
| duf2884 family protein | DU333_11540 | Not Available | Positive | 2313712 - 2314431 | 26430.8 |
| l-asparaginase 2 | DU333_11545 | Not Available | Positive | 2314607 - 2315653 | 36882.8 |
| duf1202 family protein | DU333_11550 | Not Available | Positive | 2315770 - 2316777 | 38535.4 |
| radical sam family heme chaperone hemw | DU333_11555 | Not Available | Negative | 2316846 - 2317982 | 42645.6 |
| xtp/ditp diphosphatase | DU333_11560 | Not Available | Negative | 2317975 - 2318568 | 20969.9 |
| yggu family protein | DU333_11565 | Not Available | Negative | 2318576 - 2318866 | 10429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




