Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase small subunit | DU333_13315 | Not Available | Positive | 2667224 - 2667718 | 17879.8 |
| Terminase large subunit | DU333_13320 | Not Available | Positive | 2667952 - 2669448 | 56108.5 |
| Hypothetical protein | DU333_13325 | Not Available | Positive | 2669460 - 2669642 | 6407.22 |
| Portal protein | DU333_13330 | Not Available | Positive | 2669642 - 2670883 | 46149.0 |
| Prohead protease | DU333_13335 | Not Available | Positive | 2670861 - 2671511 | 23977.5 |
| Major head protein | DU333_13340 | Not Available | Positive | 2671526 - 2672731 | 44129.6 |
| Hypothetical protein | DU333_13345 | Not Available | Positive | 2672781 - 2672981 | 7100.53 |
| Head-tail connector protein | DU333_13350 | Not Available | Positive | 2672984 - 2673307 | 12504.9 |
| Putative phage head-tail adaptor | DU333_13355 | Not Available | Positive | 2673304 - 2673714 | 15674.7 |
| Hypothetical protein | DU333_13360 | Not Available | Positive | 2673689 - 2674195 | 19802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




