Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule polysaccharide export inner-membrane protein kpse | DU333_11190 | Not Available | Negative | 2248277 - 2249425 | 43079.0 |
| kpsf/gutq family sugar-phosphate isomerase | DU333_11195 | Not Available | Negative | 2249497 - 2250480 | 35554.1 |
| eal domain-containing protein | DU333_11205 | Not Available | Negative | 2251857 - 2253392 | 57602.9 |
| duf4942 domain-containing protein | DU333_11210 | Not Available | Negative | 2253463 - 2254308 | 32519.0 |
| duf957 domain-containing protein | DU333_11215 | Not Available | Negative | 2254393 - 2254590 | 7407.73 |
| hypothetical protein | DU333_11220 | Not Available | Negative | 2254602 - 2255090 | 18036.5 |
| toxin | DU333_11225 | Not Available | Negative | 2255087 - 2255464 | 13959.7 |
| type iv toxin-antitoxin system yeeu family antitoxin | DU333_11230 | Not Available | Negative | 2255511 - 2255888 | 13799.4 |
| duf987 domain-containing protein | DU333_11235 | Not Available | Negative | 2255967 - 2256188 | 8411.2 |
| dna repair protein radc | DU333_11240 | Not Available | Negative | 2256257 - 2256733 | 17662.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




