Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone-dependent pyruvate dehydrogenase | DU333_10995 | Not Available | Positive | 2210591 - 2212309 | 62085.1 |
| low-specificity l-threonine aldolase | DU333_11000 | Not Available | Positive | 2212346 - 2213347 | 36515.9 |
| sdr family oxidoreductase | DU333_11005 | Not Available | Positive | 2213358 - 2214788 | 53781.3 |
| nad(p)-dependent oxidoreductase | DU333_11010 | Not Available | Positive | 2214887 - 2215900 | 38087.9 |
| n-acetylmuramoyl-l-alanine amidase | DU333_11015 | Not Available | Negative | 2215897 - 2216727 | 31096.2 |
| hypothetical protein | DU333_11020 | Not Available | Negative | 2216724 - 2217047 | 11437.7 |
| lipoprotein | DU333_11025 | Not Available | Positive | 2217173 - 2217688 | 18881.2 |
| arginine abc transporter atp-binding protein artp | DU333_11030 | Not Available | Positive | 2217906 - 2218634 | 27023.7 |
| arginine abc transporter substrate-binding protein | DU333_11035 | Not Available | Positive | 2218652 - 2219383 | 26961.0 |
| arginine abc transporter permease artq | DU333_11040 | Not Available | Positive | 2219390 - 2220106 | 26246.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




