Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspd | DU333_10945 | Not Available | Positive | 2199224 - 2199448 | 7969.41 |
| macrolide abc transporter atp-binding protein/permease macb | DU333_10950 | Not Available | Negative | 2199521 - 2201467 | 70636.7 |
| maca family efflux pump subunit | DU333_10955 | Not Available | Negative | 2201464 - 2202579 | 40731.5 |
| duf535 domain-containing protein | DU333_10960 | Not Available | Positive | 2202694 - 2203686 | 38254.7 |
| atp-dependent endonuclease | DU333_10965 | Not Available | Negative | 2203683 - 2205341 | 63560.9 |
| aquaporin | DU333_10970 | Not Available | Positive | 2205767 - 2206462 | 23704.2 |
| hypothetical protein | DU333_10975 | Not Available | Negative | 2206416 - 2206622 | 7272.54 |
| lysine exporter lyso family protein | DU333_10980 | Not Available | Positive | 2206783 - 2207682 | 32351.2 |
| hydroxylamine reductase | DU333_10985 | Not Available | Positive | 2207826 - 2209478 | 60051.3 |
| nadh oxidoreductase | DU333_10990 | Not Available | Positive | 2209490 - 2210458 | 35885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




