Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Klia-n domain protein | DU333_13265 | Not Available | Positive | 2661341 - 2662138 | 29800.9 |
| Hypothetical protein | DU333_13270 | Not Available | Positive | 2662146 - 2663135 | 37045.9 |
| Antitermination protein q | DU333_13275 | Not Available | Positive | 2663149 - 2663901 | 27821.4 |
| hypothetical protein | DU333_13280 | Not Available | Positive | 2664087 - 2664422 | 13010.8 |
| Holin protein | DU333_13285 | Not Available | Positive | 2664574 - 2664879 | 10837.4 |
| Endopeptidase | DU333_13290 | Not Available | Positive | 2664866 - 2665342 | 17762.1 |
| Rz | DU333_13295 | Not Available | Positive | 2665339 - 2665776 | 16102.2 |
| hypothetical protein | DU333_13300 | Not Available | Positive | 2665847 - 2666098 | 9772.9 |
| hypothetical protein | DU333_13305 | Not Available | Negative | 2666205 - 2666645 | 16703.1 |
| Hnh endonuclease | DU333_13310 | Not Available | Positive | 2666748 - 2667098 | 13151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




