Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | DU333_10785 | Not Available | Negative | 2155292 - 2156575 | 46224.6 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DU333_10790 | Not Available | Negative | 2156646 - 2157734 | 39774.4 |
| duf421 domain-containing protein | DU333_10795 | Not Available | Negative | 2157933 - 2158625 | 26251.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | DU333_10800 | Not Available | Positive | 2158755 - 2160515 | 65684.0 |
| formate transporter foca | DU333_10805 | Not Available | Positive | 2160921 - 2161778 | 30992.6 |
| formate acetyltransferase 1 | DU333_10810 | Not Available | Positive | 2161833 - 2164115 | 85362.0 |
| pyruvate formate lyase 1-activating protein | DU333_10815 | Not Available | Positive | 2164307 - 2165047 | 28205.9 |
| mfs transporter | DU333_10820 | Not Available | Negative | 2165144 - 2166292 | 41457.2 |
| hydrolase | DU333_10825 | Not Available | Positive | 2166606 - 2167232 | 23089.5 |
| dimethyl sulfoxide reductase anchor subunit | DU333_10830 | Not Available | Negative | 2167268 - 2168131 | 30811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




