Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone modulatory protein cbpm | DU333_10385 | Not Available | Positive | 2068561 - 2068866 | 11443.8 |
| molecular chaperone tord | DU333_10390 | Not Available | Negative | 2069222 - 2069821 | 22414.8 |
| trimethylamine-n-oxide reductase tora | DU333_10395 | Not Available | Negative | 2069818 - 2072364 | 94700.5 |
| pentaheme c-type cytochrome torc | DU333_10400 | Not Available | Negative | 2072364 - 2073536 | 43612.8 |
| two-component system response regulator torr | DU333_10405 | Not Available | Positive | 2073666 - 2074358 | 26244.9 |
| tmao reductase system periplasmic protein tort | DU333_10410 | Not Available | Negative | 2074331 - 2075359 | 37917.9 |
| tmao reductase system sensor histidine kinase/response regulator tors | DU333_10415 | Not Available | Positive | 2075442 - 2078174 | 100679.0 |
| 4fe-4s binding protein | DU333_10420 | Not Available | Positive | 2078257 - 2079330 | 40112.2 |
| protein gnsa | DU333_10425 | Not Available | Negative | 2079379 - 2079552 | 6575.99 |
| protein ymce | DU333_10430 | Not Available | Negative | 2079542 - 2079772 | 8727.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




