Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | DU333_10280 | Not Available | Positive | 2046770 - 2047183 | 16100.7 |
| phosphate starvation-inducible protein phoh | DU333_10285 | Not Available | Negative | 2047233 - 2048156 | 34367.4 |
| deferrochelatase/peroxidase efeb | DU333_10290 | Not Available | Negative | 2048647 - 2049918 | 46666.7 |
| iron uptake system component efeo | DU333_10295 | Not Available | Negative | 2049924 - 2051051 | 41152.9 |
| ferrous iron permease efeu | DU333_10300 | Not Available | Negative | 2051109 - 2051939 | 30401.8 |
| sodium/proline symporter putp | DU333_10305 | Not Available | Negative | 2052159 - 2053667 | 54324.3 |
| hypothetical protein | DU333_10310 | Not Available | Negative | 2053826 - 2054035 | 7733.77 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | DU333_10315 | Not Available | Positive | 2054090 - 2058052 | 143853.0 |
| hth-type transcriptional regulator rutr | DU333_10320 | Not Available | Negative | 2058092 - 2058730 | 23717.0 |
| pyrimidine monooxygenase ruta | DU333_10325 | Not Available | Positive | 2059017 - 2060108 | 39945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




