Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport component csgg | DU333_10230 | Not Available | Positive | 2034820 - 2035653 | 30559.0 |
| duf1097 domain-containing protein | DU333_10235 | Not Available | Negative | 2035718 - 2036209 | 17090.4 |
| molecular chaperone | DU333_10240 | Not Available | Negative | 2036311 - 2036865 | 20695.3 |
| phosphatase | DU333_10245 | Not Available | Negative | 2036889 - 2037626 | 26833.9 |
| glyoxylate/hydroxypyruvate reductase a | DU333_10250 | Not Available | Negative | 2037681 - 2038619 | 35373.5 |
| Trna-ser | Not Available | Not Available | Positive | 2038853 - 2038940 | Not Available |
| ggdef domain-containing protein | DU333_10260 | Not Available | Negative | 2039045 - 2040412 | 52128.0 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | DU333_10265 | Not Available | Positive | 2041000 - 2043423 | 92348.1 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | DU333_10270 | Not Available | Positive | 2043432 - 2045450 | 77398.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | DU333_10275 | Not Available | Positive | 2045443 - 2046768 | 50738.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




