Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna accumulation protein yced | DU333_09980 | Not Available | Negative | 1989193 - 1989714 | 19315.9 |
| m(7)gtp pyrophosphatase | DU333_09985 | Not Available | Positive | 1989913 - 1990497 | 21692.1 |
| ribosomal large subunit pseudouridine synthase c | DU333_09990 | Not Available | Negative | 1990609 - 1991568 | 36028.7 |
| duf2655 domain-containing protein | DU333_09995 | Not Available | Negative | 1991686 - 1992006 | 12101.5 |
| ribonuclease e | DU333_10000 | Not Available | Positive | 1992141 - 1995326 | 118183.0 |
| flagellar hook-filament junction protein flgl | DU333_10005 | Not Available | Negative | 1995521 - 1996474 | 34255.8 |
| flagellar hook-associated protein flgk | DU333_10010 | Not Available | Negative | 1996486 - 1998129 | 58032.2 |
| flagellar assembly peptidoglycan hydrolase flgj | DU333_10015 | Not Available | Negative | 1998195 - 1999136 | 34523.2 |
| flagellar p-ring protein | DU333_10020 | Not Available | Negative | 1999136 - 2000233 | 38171.9 |
| flagellar l-ring protein | DU333_10025 | Not Available | Negative | 2000245 - 2000943 | 24616.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




