Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major tail sheath protein | DU333_11155 | Not Available | Negative | 2239480 - 2240652 | 42378.3 |
| Recombinase family protein | DU333_11160 | Not Available | Negative | 2240795 - 2241361 | 21120.6 |
| Attl | Not Available | Not Available | Positive | 2651032 - 2651043 | Not Available |
| Putative integrase | DU333_13180 | Not Available | Negative | 2651178 - 2652350 | 43872.9 |
| Putative excisionase | DU333_13185 | Not Available | Negative | 2652311 - 2652517 | 7824.37 |
| hypothetical protein | DU333_13190 | Not Available | Negative | 2652559 - 2653425 | 33962.7 |
| Hypothetical protein | DU333_13195 | Not Available | Negative | 2653534 - 2654058 | 19902.1 |
| Hypothetical protein | DU333_13200 | Not Available | Negative | 2654186 - 2655010 | 30444.1 |
| Hypothetical protein | DU333_13205 | Not Available | Negative | 2655076 - 2655438 | 13145.6 |
| hypothetical | DU333_13210 | Not Available | Negative | 2655453 - 2655763 | 11406.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




