Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_09380 | Not Available | Negative | 1894214 - 1894498 | 10622.0 |
| metal abc transporter substrate-binding protein | DU333_09385 | Not Available | Positive | 1894777 - 1895691 | 33428.1 |
| manganese/iron abc transporter atp-binding protein | DU333_09390 | Not Available | Positive | 1895691 - 1896518 | 30119.5 |
| metal abc transporter permease | DU333_09395 | Not Available | Positive | 1896515 - 1897372 | 30833.7 |
| metal abc transporter permease | DU333_09400 | Not Available | Positive | 1897369 - 1898226 | 30659.9 |
| trna 2-thiouridine(34) synthase mnma | DU333_09755 | Not Available | Positive | 1942719 - 1943825 | 40917.7 |
| lysogenization regulator hfld | DU333_09760 | Not Available | Positive | 1943861 - 1944502 | 22935.0 |
| adenylosuccinate lyase | DU333_09765 | Not Available | Positive | 1944506 - 1945876 | 51531.6 |
| two-component system response regulator phop | DU333_09770 | Not Available | Positive | 1946045 - 1946716 | 25536.7 |
| sensor protein phoq | DU333_09775 | Not Available | Positive | 1946716 - 1948176 | 55283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




