Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_09330 | Not Available | Negative | 1888141 - 1888389 | 9657.78 |
| regulatory protein arir | DU333_09335 | Not Available | Negative | 1888502 - 1888768 | 9696.56 |
| two-component-system connector protein ymga | DU333_09340 | Not Available | Negative | 1888797 - 1889069 | 10318.5 |
| two-component-system connector protein ycgz | DU333_09345 | Not Available | Negative | 1889112 - 1889348 | 8694.37 |
| diguanylate phosphodiesterase | DU333_09350 | Not Available | Positive | 1889662 - 1890873 | 45347.6 |
| merr family transcriptional regulator | DU333_09355 | Not Available | Positive | 1891078 - 1891809 | 28262.2 |
| duf1398 domain-containing protein | DU333_09360 | Not Available | Positive | 1892030 - 1892434 | 15823.0 |
| hypothetical protein | DU333_09365 | Not Available | Positive | 1892487 - 1892612 | 4909.22 |
| isocitrate dehydrogenase | DU333_09370 | Not Available | Negative | 1892696 - 1892848 | 5511.76 |
| hypothetical protein | DU333_09375 | Not Available | Negative | 1893320 - 1894078 | 29688.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




