Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spovr family protein | DU333_09210 | Not Available | Positive | 1870257 - 1871789 | 60803.1 |
| fatty acid metabolism transcriptional regulator fadr | DU333_09215 | Not Available | Negative | 1871952 - 1872671 | 26970.2 |
| na(+)/h(+) antiporter nhab | DU333_09220 | Not Available | Positive | 1872893 - 1874434 | 56706.9 |
| disulfide bond formation protein dsbb | DU333_09225 | Not Available | Positive | 1874580 - 1875110 | 20129.3 |
| translesion error-prone dna polymerase v subunit umuc | DU333_09230 | Not Available | Negative | 1875155 - 1876423 | 47508.1 |
| translesion error-prone dna polymerase v autoproteolytic subunit | DU333_09235 | Not Available | Negative | 1876423 - 1876842 | 15052.2 |
| ycgn family cysteine cluster protein | DU333_09245 | Not Available | Negative | 1877636 - 1878097 | 17853.2 |
| fumarylacetoacetate hydrolase family protein | DU333_09250 | Not Available | Negative | 1878174 - 1878833 | 23682.4 |
| hypothetical protein | DU333_09255 | Not Available | Negative | 1878905 - 1879198 | 11247.7 |
| inhibitor of g-type lysozyme | DU333_09260 | Not Available | Positive | 1879440 - 1879841 | 14807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




