Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ychj family protein | DU333_08950 | Not Available | Positive | 1816315 - 1816773 | 16901.2 |
| formyltetrahydrofolate deformylase | DU333_08955 | Not Available | Positive | 1816823 - 1817665 | 31922.6 |
| Trna-tyr | Not Available | Not Available | Positive | 1817825 - 1817909 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1817943 - 1818027 | Not Available |
| is4 family transposase | DU333_08975 | Not Available | Positive | 1818458 - 1819657 | 45856.9 |
| respiratory nitrate reductase subunit gamma | DU333_08980 | Not Available | Negative | 1819710 - 1820387 | 25484.9 |
| nitrate reductase molybdenum cofactor assembly chaperone narj | DU333_08985 | Not Available | Negative | 1820387 - 1821097 | 26450.3 |
| nitrate reductase subunit beta | DU333_08990 | Not Available | Negative | 1821094 - 1822632 | 58083.6 |
| nitrate reductase subunit alpha | DU333_08995 | Not Available | Negative | 1822629 - 1826372 | 140597.0 |
| nitrate/nitrite transporter nark | DU333_09000 | Not Available | Negative | 1826765 - 1828156 | 49696.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




