Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent-cation tolerance protein cuta | DU333_08495 | Not Available | Positive | 1742828 - 1743166 | 12361.8 |
| thiol:disulfide interchange protein dsbd | DU333_08500 | Not Available | Positive | 1743142 - 1744839 | 61918.8 |
| transcriptional regulator | DU333_08505 | Not Available | Positive | 1744876 - 1745451 | 21932.3 |
| Trna-phe | Not Available | Not Available | Positive | 1745558 - 1745633 | Not Available |
| duf4102 domain-containing protein | DU333_08515 | Not Available | Positive | 1745831 - 1747096 | 47965.0 |
| tetratricopeptide repeat protein | DU333_08520 | Not Available | Positive | 1747352 - 1748395 | 40231.8 |
| hypothetical protein | DU333_08525 | Not Available | Positive | 1748538 - 1748768 | 8328.34 |
| is1 family transposase | DU333_08530 | Not Available | Positive | 1748925 - 1749000 | 2526.03 |
| outer membrane protein ompw | DU333_08830 | Not Available | Negative | 1791836 - 1792474 | 22894.1 |
| upf0259 family protein | DU333_08840 | Not Available | Positive | 1792830 - 1793573 | 26406.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




