Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DU333_08145 | Not Available | Positive | 1681708 - 1681905 | 7853.65 |
| 50s ribosomal protein l9 | DU333_08150 | Not Available | Negative | 1682016 - 1682465 | 15770.0 |
| 30s ribosomal protein s18 | DU333_08155 | Not Available | Negative | 1682507 - 1682734 | 8986.94 |
| primosomal replication protein n | DU333_08160 | Not Available | Negative | 1682739 - 1683053 | 11472.9 |
| 30s ribosomal protein s6 | DU333_08165 | Not Available | Negative | 1683060 - 1683455 | 15187.9 |
| duf1471 domain-containing protein | DU333_08170 | Not Available | Positive | 1683783 - 1684058 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | DU333_08175 | Not Available | Negative | 1684187 - 1684873 | 25339.2 |
| l-ribulose-5-phosphate 3-epimerase ulae | DU333_08180 | Not Available | Negative | 1684873 - 1685727 | 32036.4 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DU333_08185 | Not Available | Negative | 1685737 - 1686387 | 23579.4 |
| ascorbate-specific phosphotransferase enzyme iia component | DU333_08190 | Not Available | Negative | 1686401 - 1686865 | 17226.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




