Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DU333_07995 | Not Available | Negative | 1647659 - 1648681 | 35541.1 |
| sugar abc transporter atp-binding protein | DU333_08000 | Not Available | Negative | 1648695 - 1650197 | 55289.6 |
| abc transporter substrate-binding protein | DU333_08005 | Not Available | Negative | 1650337 - 1651293 | 34328.5 |
| inorganic pyrophosphatase | DU333_08010 | Not Available | Positive | 1651603 - 1652133 | 19732.6 |
| hypothetical protein | DU333_08015 | Not Available | Positive | 1652300 - 1652530 | 8770.98 |
| gamma-glutamylcyclotransferase ytfp | DU333_08020 | Not Available | Negative | 1652513 - 1652854 | 12867.2 |
| autotransporter assembly complex protein tamb | DU333_08025 | Not Available | Negative | 1652857 - 1656636 | 136754.0 |
| autotransporter assembly complex protein tama | DU333_08030 | Not Available | Negative | 1656633 - 1658366 | 64845.7 |
| peptide-methionine (s)-s-oxide reductase | DU333_08035 | Not Available | Positive | 1658572 - 1659210 | 23335.3 |
| hlyc/corc family transporter | DU333_08040 | Not Available | Positive | 1659533 - 1660876 | 49765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




