Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | DU333_07895 | Not Available | Positive | 1625536 - 1626540 | 37131.5 |
| yfcc family protein | DU333_07900 | Not Available | Positive | 1626597 - 1628000 | 49882.5 |
| argr family transcriptional regulator | DU333_07905 | Not Available | Positive | 1628116 - 1628604 | 18270.3 |
| pyrbi operon leader peptide | DU333_07910 | Not Available | Positive | 1628694 - 1628828 | 5098.43 |
| aspartate carbamoyltransferase catalytic subunit | DU333_07915 | Not Available | Positive | 1628832 - 1629767 | 34429.3 |
| aspartate carbamoyltransferase regulatory subunit | DU333_07920 | Not Available | Positive | 1629780 - 1630241 | 17121.6 |
| reactive intermediate/imine deaminase | DU333_07925 | Not Available | Positive | 1630314 - 1630700 | 13612.3 |
| magnesium-translocating p-type atpase | DU333_07930 | Not Available | Negative | 1630906 - 1633602 | 99373.1 |
| mgta regulatory leader peptide mgtl | DU333_07935 | Not Available | Negative | 1633743 - 1633796 | 2122.69 |
| hth-type transcriptional regulator trer | DU333_07940 | Not Available | Positive | 1633981 - 1634928 | 34575.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




