Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna methylase | DU333_09595 | Not Available | Negative | 1926811 - 1927338 | 19783.6 |
| Ninb | DU333_09600 | Not Available | Negative | 1927335 - 1927775 | 16678.9 |
| Exclusion protein | DU333_09605 | Not Available | Negative | 1927849 - 1928139 | 10642.1 |
| Putative replication protein p | DU333_09610 | Not Available | Negative | 1928136 - 1928837 | 26538.1 |
| Dna replication protein | DU333_09615 | Not Available | Negative | 1928834 - 1929733 | 34000.4 |
| Regulatory protein cii | DU333_09620 | Not Available | Negative | 1929766 - 1930062 | 11075.3 |
| Similar to c2 of bacteriophage l | DU333_09625 | Not Available | Negative | 1930204 - 1930419 | 7771.41 |
| Ci protein | DU333_09630 | Not Available | Positive | 1930495 - 1931190 | 25633.4 |
| hypothetical protein | DU333_09635 | Not Available | Positive | 1931230 - 1931787 | 21809.7 |
| Gp47, conserved hypothetical protein | DU333_09640 | Not Available | Positive | 1931784 - 1932536 | 28097.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




