Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate mutase gpmb | DU333_06880 | Not Available | Negative | 1434904 - 1435551 | 24066.7 |
| non-canonical purine ntp phosphatase | DU333_06885 | Not Available | Positive | 1435603 - 1436124 | 18526.1 |
| trp operon repressor | DU333_06890 | Not Available | Negative | 1436209 - 1436535 | 12355.9 |
| murein transglycosylase | DU333_06895 | Not Available | Negative | 1436625 - 1438562 | 73329.0 |
| energy-dependent translational throttle protein etta | DU333_06900 | Not Available | Positive | 1438773 - 1440440 | 62446.5 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | DU333_06905 | Not Available | Negative | 1440747 - 1441979 | 47292.3 |
| dna repair protein rada | DU333_06910 | Not Available | Negative | 1442000 - 1443382 | 49445.0 |
| phosphoserine phosphatase | DU333_06915 | Not Available | Negative | 1443431 - 1444399 | 35044.8 |
| protein smp | DU333_06920 | Not Available | Positive | 1444505 - 1445149 | 24084.2 |
| lipoate--protein ligase a | DU333_06925 | Not Available | Positive | 1445177 - 1446193 | 37882.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




