Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase small subunit | DU333_06680 | Not Available | Negative | 1395005 - 1396153 | 41417.4 |
| hypothetical protein | DU333_06685 | Not Available | Positive | 1396415 - 1396597 | 7154.17 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DU333_06690 | Not Available | Negative | 1396609 - 1397430 | 28772.4 |
| duf805 domain-containing protein | DU333_06695 | Not Available | Negative | 1397591 - 1397956 | 13660.0 |
| non-specific ribonucleoside hydrolase rihc | DU333_06700 | Not Available | Negative | 1397979 - 1398893 | 32601.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DU333_06705 | Not Available | Negative | 1398959 - 1399909 | 34721.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DU333_06710 | Not Available | Negative | 1399911 - 1400360 | 16081.9 |
| lipoprotein signal peptidase | DU333_06715 | Not Available | Negative | 1400468 - 1400962 | 18129.3 |
| isoleucine--trna ligase | DU333_06720 | Not Available | Negative | 1400962 - 1403778 | 104359.0 |
| bifunctional riboflavin kinase/fad synthetase | DU333_06725 | Not Available | Negative | 1403821 - 1404762 | 34736.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




