Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysozyme | DU333_09545 | Not Available | Negative | 1922547 - 1923044 | 18017.0 |
| Putative holin | DU333_09550 | Not Available | Negative | 1923044 - 1923259 | 7778.49 |
| porin | DU333_09555 | Not Available | Positive | 1923848 - 1924930 | 39611.6 |
| Antitermination protein q | DU333_09560 | Not Available | Negative | 1925119 - 1925502 | 14165.3 |
| Hypothetical protein | DU333_09565 | Not Available | Negative | 1925588 - 1925728 | 5539.92 |
| Holliday junction resolvase rusa | DU333_09570 | Not Available | Negative | 1925725 - 1926087 | 13846.7 |
| Hypothetical protein | DU333_09575 | Not Available | Negative | 1926084 - 1926173 | 3182.93 |
| protein ninf | DU333_09580 | Not Available | Negative | 1926107 - 1926301 | 7656.48 |
| Ninx | DU333_09585 | Not Available | Negative | 1926294 - 1926635 | 12941.3 |
| Nine protein | DU333_09590 | Not Available | Negative | 1926638 - 1926814 | 7310.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




