Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa dehydrogenase | DU333_06625 | Not Available | Positive | 1384677 - 1385819 | 42560.8 |
| l-carnitine coa-transferase | DU333_06630 | Not Available | Positive | 1385947 - 1387164 | 45055.3 |
| atp-dependent acyl-coa ligase | DU333_06635 | Not Available | Positive | 1387237 - 1388790 | 58594.5 |
| carnitinyl-coa dehydratase | DU333_06640 | Not Available | Positive | 1388899 - 1389684 | 28177.8 |
| carnitine operon protein caie | DU333_06645 | Not Available | Positive | 1389690 - 1390280 | 21160.6 |
| carnitine metabolism transcriptional regulator caif | DU333_06650 | Not Available | Negative | 1390399 - 1390794 | 15363.0 |
| hypothetical protein | DU333_06655 | Not Available | Positive | 1390829 - 1391047 | 8144.12 |
| is200/is605 family transposase | DU333_06665 | Not Available | Negative | 1391084 - 1391542 | 18028.0 |
| hypothetical protein | DU333_06670 | Not Available | Negative | 1391499 - 1391702 | 7670.37 |
| carbamoyl-phosphate synthase large chain | DU333_06675 | Not Available | Negative | 1391766 - 1394987 | 117930.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




