Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase ii | DU333_06520 | Not Available | Positive | 1360077 - 1362428 | 90112.7 |
| rna polymerase-associated protein rapa | DU333_06525 | Not Available | Positive | 1362592 - 1365498 | 109745.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | DU333_06530 | Not Available | Positive | 1365510 - 1366169 | 24834.0 |
| dnaj-like protein djla | DU333_06535 | Not Available | Negative | 1366319 - 1367134 | 30567.2 |
| lps-assembly protein lptd | DU333_06540 | Not Available | Positive | 1367389 - 1369743 | 89629.9 |
| chaperone sura | DU333_06545 | Not Available | Positive | 1369796 - 1371082 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | DU333_06550 | Not Available | Positive | 1371082 - 1372071 | 35265.1 |
| ribosomal rna small subunit methyltransferase a | DU333_06555 | Not Available | Positive | 1372068 - 1372889 | 30363.9 |
| co2+/mg2+ efflux protein apag | DU333_06560 | Not Available | Positive | 1372892 - 1373269 | 13867.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | DU333_06565 | Not Available | Positive | 1373276 - 1374124 | 31568.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




