Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DU333_06370 | Not Available | Negative | 1326850 - 1328166 | 46932.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DU333_06375 | Not Available | Negative | 1328169 - 1329251 | 39877.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DU333_06380 | Not Available | Negative | 1329245 - 1330603 | 47356.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DU333_06385 | Not Available | Negative | 1330600 - 1332087 | 53365.6 |
| peptidoglycan glycosyltransferase ftsi | DU333_06390 | Not Available | Negative | 1332074 - 1333840 | 63897.2 |
| cell division protein ftsl | DU333_06395 | Not Available | Negative | 1333856 - 1334221 | 13627.7 |
| ribosomal rna small subunit methyltransferase h | DU333_06400 | Not Available | Negative | 1334218 - 1335159 | 34879.9 |
| transcriptional regulator mraz | DU333_06405 | Not Available | Negative | 1335161 - 1335619 | 17361.0 |
| catabolite repressor/activator | DU333_06410 | Not Available | Negative | 1336221 - 1337225 | 38001.5 |
| frur/shl operon leader peptide | DU333_06415 | Not Available | Negative | 1337307 - 1337393 | 3290.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




