Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | DU333_06270 | Not Available | Negative | 1306087 - 1306638 | 20520.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | DU333_06275 | Not Available | Positive | 1306726 - 1307619 | 32818.0 |
| prepilin peptidase-dependent pilin | DU333_06280 | Not Available | Positive | 1307823 - 1308263 | 15621.7 |
| type ii secretion system protein gspe | DU333_06285 | Not Available | Positive | 1308273 - 1309658 | 50635.4 |
| type iv pilin biogenesis protein | DU333_06290 | Not Available | Positive | 1309648 - 1310850 | 44300.0 |
| guanosine monophosphate reductase | DU333_06295 | Not Available | Negative | 1310885 - 1311928 | 37385.8 |
| dephospho-coa kinase | DU333_06300 | Not Available | Positive | 1312153 - 1312773 | 22622.0 |
| cell division protein zapd | DU333_06305 | Not Available | Positive | 1312773 - 1313516 | 28279.3 |
| dna gyrase inhibitor yacg | DU333_06310 | Not Available | Positive | 1313526 - 1313723 | 7306.49 |
| 8-oxo-dgtp diphosphatase mutt | DU333_06315 | Not Available | Negative | 1313811 - 1314209 | 15122.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




