Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | DU333_06170 | Not Available | Positive | 1280439 - 1282829 | 86799.2 |
| multicopper oxidase cueo | DU333_06175 | Not Available | Negative | 1282876 - 1284426 | 56616.6 |
| hypothetical protein | DU333_06180 | Not Available | Positive | 1284592 - 1284939 | 12854.4 |
| polyamine aminopropyltransferase | DU333_06185 | Not Available | Positive | 1285045 - 1285911 | 32336.2 |
| adenosylmethionine decarboxylase | DU333_06190 | Not Available | Positive | 1285927 - 1286721 | 30430.4 |
| upf0231 family protein | DU333_06195 | Not Available | Negative | 1286759 - 1287121 | 13942.3 |
| aconitate hydratase b | DU333_06200 | Not Available | Negative | 1287296 - 1289893 | 93490.4 |
| duf3300 domain-containing protein | DU333_06205 | Not Available | Positive | 1290248 - 1292005 | 65354.6 |
| dihydrolipoyl dehydrogenase | DU333_06210 | Not Available | Negative | 1292247 - 1293671 | 50691.4 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | DU333_06215 | Not Available | Negative | 1293879 - 1295771 | 66117.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




