Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DU333_06120 | Not Available | Positive | 1272073 - 1272867 | 28165.0 |
| pantoate--beta-alanine ligase | DU333_06125 | Not Available | Positive | 1272879 - 1273730 | 31580.5 |
| rpn family recombination-promoting nuclease/putative transposase | DU333_06130 | Not Available | Negative | 1273812 - 1274696 | 33893.9 |
| aspartate 1-decarboxylase | DU333_06135 | Not Available | Positive | 1274970 - 1275350 | 13834.5 |
| polysaccharide deacetylase family protein | DU333_06140 | Not Available | Negative | 1275354 - 1276583 | 46323.0 |
| pts sugar transporter subunit iia | DU333_06145 | Not Available | Negative | 1276647 - 1277087 | 16493.9 |
| inner membrane transport permease yadh | DU333_06150 | Not Available | Negative | 1277192 - 1277962 | 28517.9 |
| abc transporter atp-binding protein | DU333_06155 | Not Available | Negative | 1277959 - 1278885 | 34679.2 |
| carbonate dehydratase | DU333_06160 | Not Available | Positive | 1278994 - 1279656 | 25140.3 |
| hypoxanthine phosphoribosyltransferase | DU333_06165 | Not Available | Negative | 1279697 - 1280233 | 20116.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




