Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3461 family protein | DU333_05970 | Not Available | Positive | 1237818 - 1238204 | 15097.0 |
| cdar family transcriptional regulator | DU333_05975 | Not Available | Negative | 1238258 - 1239388 | 42619.8 |
| serine endoprotease degp | DU333_05980 | Not Available | Negative | 1239566 - 1240990 | 49342.3 |
| deoxyguanosinetriphosphate triphosphohydrolase | DU333_05985 | Not Available | Negative | 1241120 - 1242637 | 59377.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | DU333_05990 | Not Available | Positive | 1242721 - 1243419 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | DU333_05995 | Not Available | Positive | 1243412 - 1244212 | 29296.3 |
| tric cation channel family protein | DU333_06000 | Not Available | Positive | 1244250 - 1244873 | 22129.1 |
| iron-sulfur cluster insertion protein erpa | DU333_06005 | Not Available | Negative | 1244920 - 1245264 | 12101.2 |
| hypothetical protein | DU333_06010 | Not Available | Negative | 1245257 - 1245322 | 2329.94 |
| clc family h(+)/cl(-) exchange transporter | DU333_06015 | Not Available | Negative | 1245346 - 1246767 | 50407.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




