Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DU333_05815 | Not Available | Positive | 1203346 - 1204053 | 26379.8 |
| proline--trna ligase | DU333_05820 | Not Available | Positive | 1204164 - 1205882 | 63606.2 |
| yaef family permuted papain-like enzyme | DU333_05825 | Not Available | Positive | 1205935 - 1206759 | 29972.9 |
| envelope stress response activation lipoprotein nlpe | DU333_05830 | Not Available | Negative | 1206915 - 1207625 | 25817.7 |
| aminoacyl-trna hydrolase | DU333_05835 | Not Available | Negative | 1207639 - 1208061 | 15638.9 |
| yaeq family protein | DU333_05840 | Not Available | Negative | 1208058 - 1208603 | 20847.7 |
| rho-binding antiterminator | DU333_05850 | Not Available | Positive | 1208958 - 1209218 | 9622.37 |
| trna lysidine(34) synthetase tils | DU333_05855 | Not Available | Negative | 1209266 - 1210564 | 48041.9 |
| voc family protein | DU333_05860 | Not Available | Negative | 1210629 - 1211018 | 14739.5 |
| lysine decarboxylase ldcc | DU333_05865 | Not Available | Negative | 1211075 - 1213216 | 80476.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




