Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine n1-acetyltransferase | DU333_05200 | Not Available | Negative | 1095823 - 1096383 | 21902.3 |
| duf1283 family protein | DU333_05205 | Not Available | Negative | 1096418 - 1096759 | 12974.5 |
| ynfa family protein | DU333_05210 | Not Available | Positive | 1096894 - 1097220 | 11902.1 |
| starvation-sensing protein rspa | DU333_05215 | Not Available | Positive | 1097426 - 1098640 | 45986.0 |
| hypothetical protein | DU333_05515 | Not Available | Negative | 1144282 - 1144395 | 4013.06 |
| mfs transporter | DU333_05520 | Not Available | Positive | 1144976 - 1145269 | 10605.0 |
| mannitol dehydrogenase family protein | DU333_05525 | Not Available | Positive | 1145358 - 1146818 | 53705.3 |
| putative selenium delivery protein ydfz | DU333_05530 | Not Available | Negative | 1146854 - 1147057 | 7276.83 |
| transcriptional regulator | DU333_05535 | Not Available | Negative | 1147234 - 1147920 | 26566.7 |
| nad(p)-dependent oxidoreductase | DU333_05540 | Not Available | Negative | 1148009 - 1148755 | 27234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




