Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | DU333_05150 | Not Available | Positive | 1084075 - 1085295 | 44292.7 |
| dethiobiotin synthase | DU333_05155 | Not Available | Positive | 1085420 - 1086115 | 24968.4 |
| voltage-gated clc-type chloride channel clcb | DU333_05160 | Not Available | Negative | 1086068 - 1087285 | 43035.8 |
| tat proofreading chaperone dmsd | DU333_05165 | Not Available | Negative | 1087447 - 1088061 | 23386.8 |
| dimethyl sulfoxide reductase anchor subunit | DU333_05170 | Not Available | Negative | 1088104 - 1088958 | 30543.7 |
| dimethylsulfoxide reductase | DU333_05175 | Not Available | Negative | 1088960 - 1089577 | 22752.9 |
| dimethyl sulfoxide reductase subunit a | DU333_05180 | Not Available | Negative | 1089588 - 1092011 | 89929.0 |
| dimethyl sulfoxide reductase subunit a | DU333_05185 | Not Available | Negative | 1092072 - 1094498 | 89574.7 |
| duf1161 domain-containing protein | DU333_05190 | Not Available | Negative | 1094697 - 1095002 | 10548.3 |
| ynfc family lipoprotein | DU333_05195 | Not Available | Positive | 1095110 - 1095820 | 26515.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




