Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family multidrug efflux mfs transporter | DU333_04795 | Not Available | Negative | 1016285 - 1017496 | 43447.9 |
| lysr family transcriptional regulator | DU333_04800 | Not Available | Positive | 1017609 - 1018541 | 35265.9 |
| purr family transcriptional regulator | DU333_04805 | Not Available | Negative | 1018538 - 1019563 | 38167.0 |
| ynhf family membrane protein | DU333_04810 | Not Available | Positive | 1019862 - 1019951 | 2997.87 |
| mfs transporter | DU333_04815 | Not Available | Positive | 1020117 - 1021286 | 40150.9 |
| superoxide dismutase | DU333_04820 | Not Available | Negative | 1021432 - 1022013 | 21266.8 |
| peptidoglycan endopeptidase | DU333_04825 | Not Available | Negative | 1022141 - 1022956 | 30003.3 |
| grx4 family monothiol glutaredoxin | DU333_04830 | Not Available | Positive | 1023291 - 1023638 | 12879.5 |
| endonuclease | DU333_04840 | Not Available | Negative | 1023774 - 1023917 | 5223.06 |
| ribonuclease t | DU333_04845 | Not Available | Negative | 1024010 - 1024657 | 23534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




