Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DU333_04640 | Not Available | Negative | 985295 - 986509 | 44597.7 |
| duf1870 family protein | DU333_04645 | Not Available | Negative | 986609 - 986965 | 13847.5 |
| ai-2e family transporter | DU333_04655 | Not Available | Negative | 987394 - 988506 | 39843.7 |
| fad-binding oxidoreductase | DU333_04660 | Not Available | Positive | 988720 - 991776 | 113368.0 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | DU333_04665 | Not Available | Positive | 991773 - 992183 | 14912.2 |
| hypothetical protein | DU333_04670 | Not Available | Positive | 992283 - 992471 | 7266.74 |
| iron-sulfur cluster assembly accessory protein | DU333_04675 | Not Available | Positive | 993020 - 993388 | 13314.9 |
| fe-s cluster assembly protein sufb | DU333_04680 | Not Available | Positive | 993397 - 994884 | 54742.1 |
| fe-s cluster assembly atpase sufc | DU333_04685 | Not Available | Positive | 994894 - 995640 | 27633.0 |
| fe-s cluster assembly protein sufd | DU333_04690 | Not Available | Positive | 995615 - 996886 | 46757.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




