Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin family protein | DU333_04590 | Not Available | Negative | 974604 - 974897 | 10681.7 |
| fad-dependent oxidoreductase | DU333_04595 | Not Available | Negative | 974894 - 976183 | 45875.6 |
| electron transfer flavoprotein subunit alpha | DU333_04600 | Not Available | Negative | 976238 - 977176 | 33932.9 |
| electron transfer flavoprotein | DU333_04605 | Not Available | Negative | 977196 - 977960 | 27478.0 |
| arac family transcriptional regulator | DU333_04610 | Not Available | Positive | 978276 - 979187 | 34896.2 |
| acyl-coa dehydrogenase | DU333_04615 | Not Available | Negative | 979230 - 980381 | 43004.6 |
| acetate coa-transferase ydif | DU333_04620 | Not Available | Negative | 980395 - 981990 | 57550.7 |
| 3-dehydroquinase | DU333_04625 | Not Available | Negative | 982136 - 982894 | 27450.2 |
| quinate/shikimate dehydrogenase | DU333_04630 | Not Available | Negative | 982925 - 983791 | 31243.6 |
| mfs transporter | DU333_04635 | Not Available | Negative | 983803 - 985068 | 46078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




