Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease cho | DU333_04385 | Not Available | Negative | 935301 - 936188 | 33695.9 |
| nad(+) synthetase | DU333_04390 | Not Available | Negative | 936418 - 937245 | 30682.6 |
| osmotically-inducible lipoprotein osme | DU333_04395 | Not Available | Positive | 937447 - 937785 | 12051.4 |
| hypothetical protein | DU333_04400 | Not Available | Positive | 937803 - 938063 | 9977.24 |
| pts sugar transporter subunit iib | DU333_04405 | Not Available | Positive | 938084 - 938404 | 11427.2 |
| pts n,n'-diacetylchitobiose transporter subunit iic | DU333_04410 | Not Available | Positive | 938489 - 939847 | 48346.1 |
| n,n'-diacetylchitobiose-specific phosphotransferase enzyme iia component | DU333_04415 | Not Available | Positive | 939898 - 940248 | 12778.6 |
| transcriptional regulator chbr | DU333_04420 | Not Available | Positive | 940259 - 941098 | 32810.2 |
| 6-phospho-beta-glucosidase | DU333_04425 | Not Available | Positive | 941202 - 942554 | 50413.2 |
| chitooligosaccharide deacetylase | DU333_04430 | Not Available | Positive | 942567 - 943325 | 27987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




