Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DU333_04235 | Not Available | Positive | 903989 - 904936 | 34164.3 |
| aldo/keto reductase | DU333_04240 | Not Available | Positive | 904946 - 905926 | 36288.0 |
| deor/glpr transcriptional regulator | DU333_04245 | Not Available | Positive | 906063 - 906821 | 28252.0 |
| mfs transporter | DU333_04250 | Not Available | Positive | 906939 - 908297 | 50307.0 |
| bifunctional nicotinamidase/pyrazinamidase | DU333_04255 | Not Available | Negative | 908390 - 909031 | 23335.4 |
| l-asparaginase 1 | DU333_04260 | Not Available | Negative | 909042 - 910058 | 37071.4 |
| signal peptide peptidase sppa | DU333_04265 | Not Available | Negative | 910225 - 912081 | 67265.0 |
| nad(p)h nitroreductase | DU333_04270 | Not Available | Positive | 912242 - 912793 | 20059.2 |
| selenide, water dikinase seld | DU333_04275 | Not Available | Positive | 912910 - 913953 | 36636.3 |
| dna topoisomerase iii | DU333_04280 | Not Available | Positive | 913958 - 915913 | 73339.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




