Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | DU333_04080 | Not Available | Positive | 878498 - 879613 | 42184.0 |
| dehydrogenase | DU333_04085 | Not Available | Negative | 879703 - 879873 | 6260.3 |
| leucine efflux protein leue | DU333_04095 | Not Available | Positive | 880156 - 880794 | 23262.0 |
| duf1971 domain-containing protein | DU333_04100 | Not Available | Positive | 880967 - 881326 | 13612.2 |
| duf1869 domain-containing protein | DU333_04105 | Not Available | Positive | 881330 - 881512 | 6608.63 |
| glsb/yeaq/ymge family stress response membrane protein | DU333_04110 | Not Available | Positive | 881660 - 881908 | 8671.14 |
| protein yoaj | DU333_04115 | Not Available | Negative | 881967 - 882041 | 2691.57 |
| hypothetical protein | DU333_04120 | Not Available | Negative | 882044 - 882142 | 3458.45 |
| diguanylate cyclase | DU333_04125 | Not Available | Negative | 882175 - 883200 | 38527.7 |
| duf333 domain-containing protein | DU333_04130 | Not Available | Positive | 883383 - 883637 | 8942.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




