Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine dehydratase 1 | DU333_04030 | Not Available | Negative | 868184 - 869548 | 48893.5 |
| coa pyrophosphatase | DU333_04035 | Not Available | Negative | 869732 - 870310 | 21464.0 |
| aminodeoxychorismate synthase component 1 | DU333_04040 | Not Available | Negative | 870314 - 871675 | 50957.2 |
| yoah family protein | DU333_04045 | Not Available | Positive | 871749 - 871928 | 6554.7 |
| duf1889 family protein | DU333_04050 | Not Available | Negative | 872048 - 872407 | 13259.1 |
| rida family protein | DU333_04055 | Not Available | Negative | 872769 - 873113 | 12479.8 |
| atp-dependent dna helicase | DU333_04060 | Not Available | Positive | 873245 - 875152 | 70251.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DU333_04065 | Not Available | Positive | 875210 - 875905 | 25212.3 |
| slp family lipoprotein yeay | DU333_04070 | Not Available | Positive | 875945 - 876526 | 20922.4 |
| long-chain-fatty-acid--coa ligase | DU333_04075 | Not Available | Positive | 876731 - 878416 | 62335.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




