Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | DU333_03980 | Not Available | Positive | 858889 - 859032 | 5212.44 |
| cold-shock protein cspc | DU333_03985 | Not Available | Positive | 859045 - 859254 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | DU333_03990 | Not Available | Positive | 859420 - 860229 | 30429.6 |
| manganese efflux pump mntp | DU333_03995 | Not Available | Negative | 860226 - 860792 | 20118.3 |
| duf986 domain-containing protein | DU333_04000 | Not Available | Negative | 861221 - 861679 | 17602.3 |
| pts mannose transporter subunit iid | DU333_04005 | Not Available | Negative | 861734 - 862585 | 30957.4 |
| pts mannose/fructose/sorbose transporter subunit iic | DU333_04010 | Not Available | Negative | 862598 - 863398 | 27637.6 |
| pts mannose transporter subunit eiiab | DU333_04015 | Not Available | Negative | 863461 - 864432 | 35079.6 |
| terc family protein | DU333_04020 | Not Available | Positive | 864895 - 866451 | 56531.5 |
| cyclic diguanylate phosphodiesterase | DU333_04025 | Not Available | Negative | 866455 - 868053 | 59607.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




