Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paraquat-inducible membrane protein a | DU333_03930 | Not Available | Negative | 848938 - 850221 | 48232.3 |
| gaf domain-containing protein | DU333_03935 | Not Available | Positive | 850351 - 850848 | 18020.5 |
| rna chaperone proq | DU333_03940 | Not Available | Positive | 850945 - 851643 | 25879.9 |
| carboxy terminal-processing peptidase | DU333_03945 | Not Available | Positive | 851663 - 853711 | 76741.4 |
| protease htpx | DU333_03950 | Not Available | Positive | 853903 - 854784 | 31959.3 |
| mfs transporter | DU333_03955 | Not Available | Negative | 854830 - 856203 | 48107.7 |
| dna-binding transcriptional regulator kdgr | DU333_03960 | Not Available | Positive | 856380 - 857171 | 30034.2 |
| hypothetical protein | DU333_03965 | Not Available | Negative | 857315 - 857554 | 8514.67 |
| phop/phoq regulator mgrb | DU333_03970 | Not Available | Positive | 857713 - 857856 | 5524.03 |
| hypothetical protein | DU333_03975 | Not Available | Positive | 857931 - 858218 | 10793.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




