Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | DU333_03830 | Not Available | Negative | 828960 - 829829 | 31989.4 |
| glucose-6-phosphate 1-dehydrogenase | DU333_03835 | Not Available | Positive | 830167 - 831642 | 55721.5 |
| phosphogluconate dehydratase | DU333_03840 | Not Available | Positive | 831877 - 833688 | 64669.9 |
| khg/kdpg aldolase | DU333_03845 | Not Available | Positive | 833725 - 834366 | 22285.3 |
| phosphoribosylglycinamide formyltransferase 2 | DU333_03850 | Not Available | Negative | 834422 - 835600 | 42429.2 |
| dna damage-inducible protein yebg | DU333_03855 | Not Available | Positive | 835734 - 836024 | 10717.5 |
| protein yebf | DU333_03860 | Not Available | Positive | 836091 - 836447 | 12904.3 |
| tellurite resistance terb family protein | DU333_03865 | Not Available | Positive | 836774 - 837433 | 23859.4 |
| oligopeptidase b | DU333_03870 | Not Available | Positive | 837642 - 839702 | 79453.6 |
| dna polymerase iii subunit epsilon | DU333_03875 | Not Available | Negative | 839699 - 840361 | 25134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




