Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain UMB6454 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1267645 bp
Thymine Count
1257236 bp
Guanine Count
1270293 bp
Cytosine Count
1313882 bp
Genome Length
5110933 bp
Protein-coding Genes
4626 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | DU333_03730 | Not Available | Positive | 809528 - 811957 | 88909.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | DU333_03735 | Not Available | Negative | 812122 - 813093 | 37008.6 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | DU333_03740 | Not Available | Negative | 813090 - 813833 | 27792.3 |
| hypothetical protein | DU333_03745 | Not Available | Negative | 813874 - 814269 | 15259.3 |
| duf72 domain-containing protein | DU333_03750 | Not Available | Negative | 814322 - 815140 | 31511.8 |
| hydrolase | DU333_03755 | Not Available | Negative | 815137 - 815703 | 20476.4 |
| aspartate--trna ligase | DU333_03760 | Not Available | Positive | 816013 - 817785 | 65873.2 |
| dihydroneopterin triphosphate diphosphatase | DU333_03765 | Not Available | Positive | 817778 - 818230 | 17244.5 |
| yebc/pmpr family dna-binding transcriptional regulator | DU333_03770 | Not Available | Positive | 818259 - 818999 | 26438.1 |
| crossover junction endodeoxyribonuclease ruvc | DU333_03775 | Not Available | Positive | 819034 - 819555 | 18747.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




