Escherichia coli strain FWSEC0627

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0627 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle, allowing it to thrive in various oxygen conditions. This strain is motile, possessing flagella, and typically exists in pairs or singles. Its optimal growth temperature is 37°C, classifying it as mesophilic. FWSEC0627 is primarily host-associated, with a broad range of hosts including Homo sapiens, Gallus gallus, Bos taurus, and various other vertebrates, invertebrates, and plants. This extensive list highlights its ecological versatility and adaptive capabilities. The bacterium has a single replicon and is characterized by having two membranes, consistent with its classification within the Enterobacteriaceae family. This strain is notable for its pathogenic potential in humans, being associated with a variety of health effects such as urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). Such infections can lead to significant health complications, including renal failure and sepsis, underscoring the importance of monitoring and controlling E. coli infections. The presence of FWSEC0627 in diverse hosts suggests ecological interactions that may contribute to its transmission and survival in various environments. Its ability to cause a wide array of diseases in different organisms not only emphasizes its adaptability but also raises concerns about public health and food safety, particularly in relation to foodborne infections. Understanding the ecological dynamics of FWSEC0627 can help inform strategies for preventing its spread and mitigating its health impacts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0627

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0627
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0627 plasmid unnamed3

Gene Summary

Adenine Count

1234275 bp

Thymine Count

1228226 bp

Guanine Count

1253817 bp

Cytosine Count

1277308 bp

Genome Length

5001044 bp

Protein-coding Genes

4526 genes

Non-Coding Genes

282 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding protein stpaC9347_20415Not AvailableNegative4233002 - 423340615348.4
l-alanine exporter alaeC9347_20420Not AvailablePositive4234074 - 423452316950.0
duf2002 family proteinC9347_20425Not AvailableNegative4234560 - 423490413066.5
duf883 domain-containing proteinC9347_20430Not AvailablePositive4235056 - 423538511847.9
nrdh-redoxinC9347_20435Not AvailablePositive4235633 - 42358789139.98
class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdiC9347_20440Not AvailablePositive4235875 - 423628515343.2
ribonucleotide-diphosphate reductase subunit alphaC9347_20445Not AvailablePositive4236258 - 423840280440.5
class 1b ribonucleoside-diphosphate reductase subunit betaC9347_20450Not AvailablePositive4238412 - 423937136503.1
glycine betaine/l-proline abc transporter atp-binding proteinC9347_20455Not AvailablePositive4239726 - 424092844179.6
proline/glycine betaine abc transporter permease prowC9347_20460Not AvailablePositive4240921 - 424198537620.1

Displaying genes 4131 – 4140 of 4811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total