Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0627 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1234275 bp
Thymine Count
1228226 bp
Guanine Count
1253817 bp
Cytosine Count
1277308 bp
Genome Length
5001044 bp
Protein-coding Genes
4526 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dksa/trar family c4-type zinc finger protein | C9347_15215 | Not Available | Positive | 3163032 - 3163298 | 9772.33 |
| duf1471 domain-containing protein | C9347_15220 | Not Available | Positive | 3163563 - 3163823 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | C9347_15225 | Not Available | Negative | 3164051 - 3165136 | 38875.2 |
| dna-binding protein ybib | C9347_15230 | Not Available | Negative | 3165277 - 3166239 | 35031.6 |
| atp-dependent dna helicase ding | C9347_15235 | Not Available | Negative | 3166267 - 3168417 | 81426.8 |
| nadar family protein | C9347_15240 | Not Available | Positive | 3168537 - 3169019 | 18673.3 |
| atp-dependent rna helicase rhle | C9347_15245 | Not Available | Negative | 3169251 - 3170615 | 50022.4 |
| transcriptional regulator | C9347_15250 | Not Available | Positive | 3170844 - 3171515 | 24965.1 |
| secretion protein hlyd | C9347_15255 | Not Available | Positive | 3171518 - 3172513 | 36287.7 |
| abc transporter atp-binding protein | C9347_15260 | Not Available | Positive | 3172506 - 3174242 | 63163.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





