Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport atp-binding protein oppf | C9344_20150 | Not Available | Negative | 4076722 - 4077726 | 37183.8 |
| abc transporter atp-binding protein | C9344_20155 | Not Available | Negative | 4077723 - 4078736 | 37148.7 |
| peptide abc transporter permease | C9344_20160 | Not Available | Negative | 4078748 - 4079656 | 33023.9 |
| oligopeptide abc transporter permease oppb | C9344_20165 | Not Available | Negative | 4079671 - 4080591 | 33503.3 |
| oligopeptide abc transporter substrate-binding protein oppa | C9344_20170 | Not Available | Negative | 4080677 - 4082308 | 60979.1 |
| naat family transporter yche | C9344_20175 | Not Available | Negative | 4083046 - 4083693 | 23522.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | C9344_20180 | Not Available | Positive | 4084170 - 4086845 | 96132.5 |
| thymidine kinase | C9344_20190 | Not Available | Negative | 4088147 - 4088764 | 23399.9 |
| dna-binding protein h-ns | C9344_20195 | Not Available | Positive | 4089369 - 4089782 | 15556.5 |
| utp--glucose-1-phosphate uridylyltransferase | C9344_20200 | Not Available | Negative | 4089926 - 4090834 | 32944.2 |
Pathways
475 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





