Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ymce | C9344_18170 | Not Available | Negative | 3681857 - 3682087 | 8701.56 |
| cold-shock protein | C9344_18175 | Not Available | Negative | 3682062 - 3682250 | 7104.55 |
| cold-shock protein cspg | C9344_18180 | Not Available | Negative | 3682261 - 3682473 | 7781.14 |
| cold-shock protein csph | C9344_18185 | Not Available | Positive | 3682759 - 3682971 | 7720.48 |
| threonine-rich inner membrane protein gfca | C9344_18190 | Not Available | Positive | 3683413 - 3683718 | 9508.04 |
| lipoprotein gfcb | C9344_18195 | Not Available | Positive | 3683825 - 3684469 | 24268.9 |
| hypothetical protein | C9344_18200 | Not Available | Positive | 3684466 - 3685212 | 27329.7 |
| yjbh domain-containing protein | C9344_18205 | Not Available | Positive | 3685212 - 3687308 | 78720.3 |
| polysaccharide export protein | C9344_18210 | Not Available | Positive | 3687354 - 3688493 | 41743.2 |
| protein-tyrosine-phosphatase | C9344_18215 | Not Available | Positive | 3688481 - 3688927 | 16386.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





