Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1312189 bp
Thymine Count
1316351 bp
Guanine Count
1334197 bp
Cytosine Count
1326523 bp
Genome Length
5302302 bp
Protein-coding Genes
4982 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase cytochrome b556 subunit | C9344_16955 | Not Available | Positive | 3445307 - 3445696 | 14314.1 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | C9344_16960 | Not Available | Positive | 3445690 - 3446037 | 12868.3 |
| succinate dehydrogenase flavoprotein subunit | C9344_16965 | Not Available | Positive | 3446037 - 3447803 | 64453.6 |
| succinate dehydrogenase iron-sulfur subunit | C9344_16970 | Not Available | Positive | 3447819 - 3448535 | 26771.4 |
| 2-oxoglutarate dehydrogenase e1 component | C9344_16975 | Not Available | Positive | 3448836 - 3451637 | 105068.0 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | C9344_16980 | Not Available | Positive | 3451652 - 3452869 | 44014.0 |
| succinyl-coa ligase subunit beta | C9344_16985 | Not Available | Positive | 3452963 - 3454129 | 41395.1 |
| succinyl-coa ligase subunit alpha | C9344_16990 | Not Available | Positive | 3454129 - 3454998 | 29779.3 |
| gntr family transcriptional regulator | C9344_16995 | Not Available | Negative | 3455102 - 3455824 | 28248.9 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | C9344_17000 | Not Available | Positive | 3455933 - 3457909 | 69642.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





